Chinese Bulletin of Botany ›› 2008, Vol. 25 ›› Issue (04): 449-454.

• 实验简报 • Previous Articles     Next Articles

Effect of the Quantity of AFLP Primer Combinations on Accurately Identifying Bamboo Genetic Relationships

Lubin Li1, Xiaojun Guo2, Zhenhua Peng1, Guanshui Liu1, Hongshui Yuan2, Baocheng Zhu2, Kai Yang3*   

  1. 1Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China; 2College of Life Sciences, Agriculture University of Hebei, Baoding 071001, China
  • Received:2007-11-09 Revised:2008-03-18 Online:2008-07-01 Published:2008-07-01
  • Contact: Kai Yang3*

Abstract: To investigate the effect of the quantity of primer combinations on identifying genetic relationships among bamboo species accurately , we analyzed the diversity of 26 bamboo species with amplified fragment length polymorphism(AFLP). We selected 10 pairs of AFLP primer, and the 10 primer combinations of AFLP markers were analyzed by Nei's genetic distance/unw eighted pair group method analysis (UPGMA). Each pair of primers resulted in a group designation, and the relations among the 26 species were confirmed consistently with an increased number of random combinations of AFLP markers used as a clustering statistic. For study of phylogenetics, a sufficient quantity of primer combinations can reveal exact clustering relations. The method of accumulating random combinations of AFLP primers and clustering analysis was applied, and the least number of combinations for testing breeding was confirmed by clustering relations.