Plant Diversity ›› 2021, Vol. 43 ›› Issue (02): 93-101.DOI: 10.1016/j.pld.2021.02.001
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Ran Menga, Ying Menga, Yong-Ping Yangb,c, Ze-Long Niea
Received:
2020-07-19
Revised:
2021-01-21
Online:
2021-04-25
Published:
2021-05-20
Contact:
Ze-Long Nie
Supported by:
Ran Meng, Ying Meng, Yong-Ping Yang, Ze-Long Nie. Phylogeny and biogeography of Maianthemum (Asparagaceae: Nolinoideae) revisited with emphasis on its divergence pattern in SW China[J]. Plant Diversity, 2021, 43(02): 93-101.
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APG IV, 2016. An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants:APG IV. Bot. J. Linn. Soc. 18, 1-20. Boufford, D.E., Van Dyck, P.P., 1999. South-Central China. In:Mittermeier, R.A., Myers, N., Mittermeier, C.G. (Eds.), Hotspots:Earth's Biologically Richest and Most Endangered Terrestrial Ecoregions. CEMEX, Mexico City, pp. 338-351. Buerki, S., Jose, S., Yadav, S.R., et al., 2012. Contrasting biogeographic and diversification patterns in two Mediterranean-type ecosystems. PLoS One 7, e39377. Buerki, S., Manning, J.C., Forest, F., 2013. Spatio-temporal history of the disjunct family Tecophilaeaceae:a tale involving the colonization of three Mediterranean-type ecosystems. Ann. Bot. 111, 361-373. Chen, S., Guan, K., Zhou, Z., et al., 2005. Molecular phylogeny of Incarvillea(Bignoniaceae) based on ITS and trnL-F sequences. Am. J. Bot. 92, 625-633. Chen, S.C., Kim, D.K., Chase, M.W., et al., 2013. Networks in a large-scale phylogenetic analysis:reconstructing evolutionary history of Asparagales (Lilianae) based on four plastid genes. PLoS One 8, e59472. Chen, X.-Q., Tamura, M.N., 2000. Polygonatum. In:Wu, Z.-Y., Raven, P.H. (Eds.), Flora of China. Science Press and Missouri Botanical Garden Press, Beijing and St.Louis, pp. 223-232. Conran, J.G., Tamura, M.N., 1998. Convallariaceae. In:Kubitzki, K. (Ed.), The Families and Genera of Vascular Plants, vol. 3. Springer-Verlag, Berlin. Donoghue, M.J., Smith, S.A., 2004. Patterns in the assembly of temperate forests around the Northern Hemisphere. Philos. Trans. R. Soc. London Biol. 359, 1633-1644. Doyle, J.J., Doyle, J.L., 1987. A rapid DNA isolation procedure from small quantities of fresh leaf tissues. Phytochem. Bull. 19, 11-15. Drummond, A.J., Ho, S.Y., Phillips, M.J., et al., 2006. Relaxed phylogenetics and dating with confidence. PLoS Biol. 4, e88. Drummond, A.J., Rambaut, A., 2007. BEAST:Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7, 214. Ebersbach, J., Muellner-Riehl, A.N., Michalak, I., et al., 2017. In and out of the Qinghai-Tibet Plateau:divergence time estimation and historical biogeography of the large arctic-alpine genus Saxifraga L. J. Biogeogr. 44, 900-910. Favre, A., Päckert, M., Pauls, S.U., et al., 2015. The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas. Biol. Rev. 90, 236-253. Forest, F., 2009. Calibrating the Tree of Life:fossils, molecules and evolutionary timescales. Ann. Bot. 104, 789-794. Friis, E.M., Crane, P.R., Pedersen, K.R., 2011. Early Flowers and Angiosperm Evolution.Cambridge University Press, Cambridge. Hara, H., 1987. Notes towards a revision of the Asiatic species of the genus Smilacina.J. Fac. Sci. Univ. Tokyo Sect. Ⅲ Bot. 14, 137-159. Harrison, T.M., Copeland, P., Kidd, W.S.F., et al., 1992. Raising tibet. Science 255, 1663-1670. Hopkins, D.M., 1967. The Bering Land Bridge. Stanford University Press, Stanford, California. Katoh, K., Toh, H., 2008. Recent developments in the MAFFT multiple sequence alignment program. Briefings Bioinf. 9, 286-298. Kim, C., Cameron, K.M., Kim, J.-H., 2017. Molecular systematics and historical biogeography of Maianthemum s.s. Am. J. Bot. 104, 939-952. Kim, J.-H., Kim, D.-K., Forest, F., et al., 2010. Molecular phylogenetics of Ruscaceae sensu lato and related families (Asparagales) based on plastid and nuclear DNA sequences. Ann. Bot. 106, 775-790. Kim, S.C., Lee, N.S., 2007. Generic delimitation and biogeography of Maianthemum and Smilacina (Ruscaceae sensu lato):preliminary results based on partial 30 matK gene and trnK 30 intron sequences of cpDNA. Plant Syst. Evol. 265, 1-12. LaFrankie, J.V., 1986a. Morphology and taxonomy of the New world species of Maianthemum (Liliaceae). J. Arnold Arbor. 67, 371-439. LaFrankie, J.V., 1986b. Transfer of the species of Smilacina to Maianthemum (Liliaceae). Taxon 35, 584-589. Lee, C., Wen, J., 2004. Phylogeny of Panax using chloroplast trnC-trnD intergenic region and the utility of trnCetrnD in interspecific studies of plants. Mol.Phylogenet. Evol. 31, 894-903. Li, H., 1990. Infrageneric system of the genus Maianthemum. Act. Bot. Yunnan. S3 1-12. Liu, J.-Q., Duan, Y.-W., Hao, G., et al., 2014. Evolutionary history and underlying adaptation of alpine plants on the QinghaieTibet Plateau. J. Syst. Evol. 52, 241-249. Lu, P.-L., Morden, C.W., 2014. Phylogenetic relationships among Dracaenoid genera(Asparagaceae:Nolinoideae) inferred from chloroplast DNA loci. Syst. Bot. 39, 90-104. Meng, Y., Nie, Z.-L., Deng, T., et al., 2014. Phylogenetics and evolution of phyllotaxy in the Solomon's seal genus Polygonatum (Asparagaceae:Polygonateae). Bot. J.Linn. Soc. 176, 435-451. Meng, Y., Nie, Z.-L., Yang, Y.-P., et al., 2005. Karyomorphology of Maianthemum sensu lato (Polygonatae, ruscaceae). J. Plant Res. 118, 155-162. Meng, Y., Wen, J., Nie, Z.-L., et al., 2008. Phylogeny and biogeographic diversification of Maianthemum (Ruscaceae:Polygonatae). Mol. Phylogenet. Evol. 49, 424-434. Milne, R.I., 2006. Northern hemisphere plant disjunctions:a window on tertiary land bridges and climate change? Ann. Bot. 98, 465-472. Müller, K., Müller, J., Quandt, D., 2010.2010. PhyDE:Phylogenetic Data Editor version 1.0. http://www.phyde.de. (Accessed 23 November 2010). Myers, N., Mittermeier, R.A., Mittermeier, C.G., et al., 2000. Biodiversity hotspots for conservation priorities. Nature 403, 853-858. Nie, Z.-L., Sun, H., Beardsley, P.M., et al., 2006. Evolution of biogeographic disjunction between eastern Asia and eastern North America in Phryma (Phrymaceae).Am. J. Bot. 93, 1343-1356. Nie, Z.-L., Wen, J., Gu, Z.-J., et al., 2005. Polyploidy in the flora of the Hengduan Mountains hotspot, southwestern China. Ann. Mo. Bot. Gard. 92, 275-306. Nylander, J.A.A., 2004. MrModeltest V2. Program Distributed by the Author. Evolutionary Biology Centre. Uppsala University. Nylander, J.A.A., Wilgenbusch, J.C., Warren, D.L., et al., 2008. AWTY (are we there yet?):a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24, 581-583. Piper, J.K., 1989. Light, flowering, and fruiting within patches of Smilacina racemosa and Smilacina stellata (Liliaceae). Bull. Torrey Bot. Club 116, 247-257. Rambau, A., Suchard, M.A., Xie, D., et al., 2014. Tracer v1.6. available from:http://beast.bio.ed.ac.uk/tracer. Rana, S.K., Luo, D., Rana, H.K., et al., 2021. Molecular phylogeny, biogeography and character evolution of the montane genus Incarvillea Juss. (Bignoniaceae). Plant Divers. 43, 1-14. Ronquist, F., Huelsenbeck, J.P., 2003. MrBayes 3:Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574. Rudall, P.J., Conran, J.G., Chase, M.W., 2000. Systematics of Ruscaceae/Convallariaceae:a combined morphological and molecular investigation. Bot. J.Linn. Soc. 134, 73-92. Shi, Y.-F., Li, J.-J., Li, B.-Y., 1998. Uplift and Environmental Changes of Qinghai-Tibetan Plateau in the Late Cenozoic. Guangdong Science and Technology Press, Guangzhou, China. Spicer, R.A., Farnsworth, A., Su, T., 2020. Cenozoic topography, monsoons and biodiversity conservation within the Tibetan Region:an evolving story. Plant Divers. 42, 229-254. Spicer, R.A., Harris, N.B.W., Widdowson, M., et al., 2003. Constant elevation of southern Tibet over the past 15 million years. Nature 421, 622-624. Stamatakis, A., 2006. RAxML-VI-HPC:maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22, 2688-2690. Sun, H., 2002. Evolution of Arctic-Tertiary flora in Himalayan-Hengduan mountains.Acta Bot. Yunnan. 24, 671-688. Sun, H., Zhang, J., Deng, T., et al., 2017. Origins and evolution of plant diversity in the Hengduan Mountains, China. Plant Divers. 39, 161-166. Therman, E., 1956. Cytotaxonomy of the tribe Polygonatae. Am. J. Bot. 43, 134-142. Tiffney, B.H., 1985. Perspectives on the origin of the floristic similarity between eastern Asia and eastern North America. J. Arnold Arbor. 66, 73-94. Wang, G.Y., Yang, Y.P., 2018. Hypothesizing the origin, migration routes, and distribution patterns of Ophiopogon (Asparagaceae) in east and southeast Asia. J. Syst. Evol. 56, 194-201. Wang, J.-J., Yang, Y.-P., Sun, H., et al., 2016. The biogeographic south-north divide of Polygonatum (Asparagaceae tribe Polygonateae) within eastern Asia and its recent dispersals in the Northern Hemisphere. PLoS One 11, e0166134. Wang, Y.-J., Susanna, A., Raab-Straube, E.V., et al., 2009. Island-like radiation of Saussurea (Asteraceae:Cardueae) triggered by uplifts of the Qinghai-Tibetan Plateau. Biol. J. Linn. Soc. 97, 893-903. Wen, J., 1999. Evolution of eastern Asian and eastern North American disjunct distributions in flowering plants. Annu. Rev. Ecol. Syst. 30, 421-455. Wen, J., Ickert-Bond, S., Nie, Z.-L., et al., 2010. Timing and modes of evolution of eastern Asian-north American biogeographic disjunctions in seed plants. In:Long, M., Gu, H., Zhou, Z. (Eds.), Darwin's Heritage Today:Proceedings of the Darwin 2010 Beijing International Conference. Higher Education Press, Beijing, pp. 252-269. Wen, J., Zhang, J.-Q., Nie, Z.-L., et al., 2014. Evolutionary diversifications of plants on the Qinghai-Tibetan plateau. Front. Genet. 5, 4. Wu, C.Y., 1988. Hengduan Mountains flora and her significance. J. Jap. Bot. 63, 297-311. Xiang, Q.-Y., Zhang, W.H., Ricklefs, R.E., et al., 2004. Regional differences in rates of plant speciation and molecular evolution:a comparison between eastern Asia and eastern North America. Evolution 58, 2175-2184. Yue, J.-P., Sun, H., Baum, D.A., et al., 2009. Molecular phylogeny of Solms-laubachia(Brassicaceae) s.l., based on multiple nuclear and plastid DNA sequences, and its biogeographic implications. J. Syst. Evol. 47, 402-415. Zhang, J.-W., Nie, Z.-L., Wen, J., et al., 2011. Molecular phylogeny and biogeography of three closely related genera, Soroseris, Stebbinsia, and Syncalathium(Asteraceae, Cichorieae), endemic to the Tibetan Plateau, SW China. Taxon 60, 15-26. Zhou, Z., Hong, D.-Y., Niu, Y., et al., 2013. Phylogenetic and biogeographic analyses of the Sino-Himalayan endemic genus Cyananthus (Campanulaceae) and implications for the evolution of its sexual system. Mol. Phylogenet. Evol. 68, 482-497. |
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